Targetprofiler

Target profiler is running on a server in Poirazi Lab, Institute of Molecular Biology and Biotechnology (IMBB), FORTH, Heraklion, Greece.

When you use Target profiler in your research, please cite our paper: Oulas A, Karathanasis N, Louloupi A, Iliopoulos I, Kalantidis K, Poirazi P. A new microRNA target prediction tool identifies a novel interaction of a putative miRNA with CCND2. RNA Biol. 2012 Sep;9(9):1196-207. doi: 10.4161/rna.21725; PMID: 22954617; PMCID: PMC3579887.

Note: You can download all data from Targetprofiler here:

Choose a miRNA sequence file to upload: Help?

Choose a target sequence file to upload: Help?

Enter an Entrez gene ID (i.e., CCND2):

Enter a microRNA ID (i.e., hsa-miR-182):

Note: You can search for a specific gene targeted by a specific miRNA by providing both gene and miRNA ID.

Conservation Threshold:

HMM Threshold:

Energy Threshold:

For questions, comments and feedback regarding Targetprofiler, please contact Panayiota Poirazi (software [AT] dendrites [DOT] gr)