Targetprofiler

Targetprofiler is running on a server in Poirazi Lab, Institute of Molecular Biology and Biotechnology (IMBB), FoRTH, Heraklion, Greece.

Choose a miRNA sequence file to upload: Help?

Choose a target sequence file to upload: Help?

Enter an Entrez gene ID (i.e.CCND2):

Enter a microRNA ID (i.e. hsa-miR-182):

*You can search for a specific gene targeted by a specific miRNA by providing both gene and miRNA ID.

Conservation Threshold:

HMM Threshold:

Energy Threshold:

*You can download all data from Targetprofiler here:

Please cite Targetprofiler using the following reference: A. Oulas, N. Karathanasis, A. Louloupi, I. Iliopoulos, K. Kalantidis and P. Poirazi. A new microRNA target prediction tool identifies a novel interaction of a putative miRNA with CCND2, RNA Biol. 2012 Sep 1;9(9).

For questions, comments and feedback regarding Targetprofiler, please contact Panayiota Poirazi (software [AT] dendrites [DOT] gr)