MatureBayes


A tool for finding mature miRNA within a miRNA precursor sequence using a Naive Bayes classifier.

Paste the sequence of a single miRNA precursor:

Example:

UACAAUCCAACGAGGAUUCUAAUUUCUCCACGUCUUUGGUAAUAAGGUUUGGCAAAGAUGUGGAAAAAUUGGAAUCCUCAUUCGAUUGGUUAUAACCA

OR

uacaauccaaugagguucuaauuucuccacgucuuugguaauaagguuuggcaaagauguggaaaaauuggaauccucauucgauugguuauaacca





Submit a file with multiple sequences in the following format:

Simple text format where each sequence occupies two lines. The first line has the form:
> name
where name is information assing to the sequence and the second line is the actual sequence.

Input Example:
>hsa-mir-576 MI0003583
UACAAUCCAACGAGGAUUCUAAUUUCUCCACGUCUUUGGUAAUAAGGUUUGGCAAAGAUGUGGAAAAAUUGGAAUCCUCAUUCGAUUGGUUAUAACCA
>hsa-mir-194-2 MI0000732
UGGUUCCCGCCCCCUGUAACAGCAACUCCAUGUGGAAGUGCCCACUGGUUCCAGUGGGGCUGCUGUUAUCUGGGGCGAGGGCCAG


Download the source code (tar.gz, 4,04 MB)


For questions, comments and feedback regarding MatureBayes, please contact Panayiota Poirazi (software [AT] dendrites [DOT] gr)